ScanpEx

ScanPy Extension and kwarg Preferences
Most codes were initially employed in “Design-of-Experiments for Nonlinear, Multivariate Biology: Rethinking Experimental Design through Perturb-seq”
Related repositories:

Documentation

Visit https://scanpex.readthedocs.io/en/latest/

Installation

pip install scanpex

Citation

@article{okano2025design,
  title={Design-of-Experiments for Nonlinear, Multivariate Biology: Rethinking Experimental Design through Perturb-seq},
  author={Okano, Yuji and Ishikawa, Tetsuo and Sato, Yasunori and Okano, Hideyuki and Sakurada, Kazuhiro},
  journal={bioRxiv},
  pages={2025--12},
  year={2025},
  publisher={Cold Spring Harbor Laboratory}
}