scanpex package

Subpackages

• scanpex.ft package
  • Module contents
    • GeneList
      • GeneList.genes
      • GeneList.ids
      • GeneList.data
      • GeneList.score_name
      • GeneList.score_prob_name
      • GeneList.category
      • GeneList.caption
      • GeneList.get_matrix()
      • GeneList.select_correlated_genes()
      • GeneList.select_independent_genes()
• scanpex.ml package
  • Subpackages
    • scanpex.ml.lightgbm_args package
      • Module contents
  • Module contents
• scanpex.pl package
  • Subpackages
    • scanpex.pl.ml_evaluation package
      • Module contents
    • scanpex.pl.preferences package
      • Module contents
  • Module contents
    • curate_phase()
    • gene_list()
    • scrublet()
    • subplots()
    • umap()
• scanpex.pp package
  • Module contents
    • get_quantiles()
    • scrublet()
• scanpex.sns package
  • catlollipop()
  • lollipop()
  • vinswarm()
• scanpex.sq package
  • Module contents
    • GeneCacheManager
      • GeneCacheManager.cache_dir
      • GeneCacheManager.registry_path
      • GeneCacheManager.recipes
      • GeneCacheManager.registry
      • GeneCacheManager.clear_cache()
      • GeneCacheManager.get()
      • GeneCacheManager.load()
      • GeneCacheManager.register_recipe()
    • ensembl_mapper()
    • gene_query()
    • xor()
• scanpex.tl package
  • Module contents
    • curate_phase()
    • get_degs()
    • prob_genes()
    • score_genes_cell_cycle()
    • seacells()
    • top_degs()

Module contents